From Chem Lab to Gridiron

Student-athlete Jake Lennin
Jake Lenning ’15

Three student scientists/athletes transitioned from the laboratory to the gridiron on August 16, the first day for Hornet football practice. Jake Lenning ’15 (chemistry major, health studies concentration), Joe Widmer ’14 (chemistry major, biochemistry concentration), and Jake Hillenberg ’14 (chemistry and psychology major, neurosciences concentration) spent the summer doing chemistry research–Lenning in the lab of Professor of Chemistry Greg Slough; Widmer and Hillenberg in the lab of Associate Professor of Chemistry Jennifer Furchak. Lenning’s research involves testing for differences in two variations of a resin known as the Wang Resin. Widmer and Hillenberg were working outside the laboratory on the day I visited. Lenning plays wide receiver for the Hornets, Widmer and Hillenberg are defensive linemen. The 2013 season will be the team’s second on the new Angell Field, and Lenning is excited. “We had a good season last year,” he said, “and that success will be a good foundation to build a great season this year.”

Liver Chemists

Rina FujiwaraBecause its name sounds like a vintage fighter plane, one might think the “Heme Team” that works with this enzyme is a group of pilots or aviation mechanics. But P450 (short for Cytochrome P450) refers to a family of enzymes that do vital work in the human body such as clearance and transformation of pharmaceutical drugs in the liver. And the “Heme Team” (named for heme, an iron-containing chemical component in all members of the P450 family) are four student research assistants working this summer in the chemistry lab of Professor Laura Furge. The team includes Rina Fujiwara ’15 (pictured at left), Amanda Bolles ’14, Mara Livezey ’13, and Parker De Waal ’13.

According to Fujiwara, Cytochrome P450 2D6—one member of the enzyme family—is responsible for the metabolism (think: conversion into a useful form) of some 20 percent of the medicines we take. So it’s definitely a P450 worthy of study—which, of course, means nature made it difficult to grow in a laboratory setting (as sure as the vegetables your mother said were good for you always tasted terrible). In fact, a great many P450 enzymes are intriguing, and the chemical modification of them and their mutations could one day have significant application in making medicines more effective.

Enter the Heme Team. Part of its summer work, says Fujiwara, has been to use recombinant bacteria (bacteria modified to include the DNA of P450 2D6) to grow the enzyme. Then team members try to separate the purified enzyme from the bacterial culture. Last year, they came close to achieving the goal. This year they developed a new protocol in which the bacteria cells (think: P450 factories) grow more slowly. Fujiwara is also doing work to obtain an even more difficult to express mutant version of 2D6, and that work might become the basis of her Senior Individualized Project next year.

On the threshold of her third year at K, the international student from Japan (chemistry major and thinking about a second major in biology) has always loved science, particularly the area of nutrition. This is her first year in the Furge lab, and she loves working with Dr. Furge and her fellow research assistants. “They are great mentors,” says Fujiwara, “and always help me with my many questions, no matter how elementary those questions may seem.” One exciting side effect of her work this summer, she adds, is the enthusiasm it has sparked for cell biology and biochemistry, two courses she is eager to take during her junior year.

Another great side effect is Dr. Furge’s expertise in another kind of chemistry—baking! “She makes delicious carrot cake and blueberry pies and brings them in for her research students,” says Fujiwara. “I love this lab!”

Psychology Major’s Research Accepted for Publication

Mara Richman presents work on mental health and the drug court system
Mara Richman ’15 presents work on mental health and the drug court system.

Psychology major Mara Richman ’15 is second author on a paper selected for publication. The paper is titled “Neurocognitive Functioning in Patients with 22q11.2 Deletion Syndrome: A Meta-Analytic Review,” and it will be featured in an upcoming issue in the Journal of the Academy of Adolescent and Child Psychiatry. Co-authors include Paul Moberg, Ph.D.; Chelsea Morse, M.S.; Vidyaluta Kamath, Ph.D.; Ruben Gur, Ph.D.; and Racquel Gur, M.D., Ph.D. Last fall Richman studied and worked under the research supervision of Moberg at the University Of Pennsylvania (Philadelphia) Perelman School Of Medicine’s Schizophrenia Research Center.

Richman’s research has prompted her to become further involved in mental health and psychology research. This summer she is doing work at a summer research institute at the University of South Florida (Tampa). She was selected from a field of 200 people to attend the institute. Her research there (under the mentorship of Kathleen Moore, Ph.D., and Blake Barrett, M.S.P.H.) focuses on co-occurring mental health disorders in the drug court system. Titled “Findings from a drug court program of female offenders with co-occurring disorders,” her work has been presented twice this summer at conferences and will be revised for publication this fall.

It’s not dirt, it’s SOIL: Reflections from a K summer internship

Monica Cooper ′14says she is “really excited about pursuing a masters and/or Ph.D. after I graduate.”

Monica Cooper ′14 in a lab
Monica Cooper ′14 prepares a 96 well micro plate in Dr. Sarah Emery’s lab at the University of Louisville. Photo credit: Phung Nguyen.

A big reason for her enthusiasm is taking place right now–her summer internship working on the Kellogg Biological Station Long-term Ecological Research experiment, or KBS LTER, part of Michigan State University’s Research Experiences for Undergraduates (REU) program, funded by the National Science Foundation.

The KBS is located in Hickory Corners, Mich., not far from Kalamazoo. Monica, a biology major who completed her K study abroad in Quito, Ecuador, is working with KBS LTER scientists at the University of Louisville in Kentucky where she studies “a pesky little protein,” goes “botanizing” in local parks, and explores the Red River Gorge.

“I hope to be a community level ecologist, and never really pictured myself in a lab, indoors, for a whole summer,” wrote Monica in a recent blog post about her summer internship. “Through this REU, I have learned an incredible amount about soil ecology, botany, and what research really is.”

“Monica wrote a terrific blog about her research experience,” wrote MSU Agriculture & Ecology Education & Outreach Specialist Julie Doll, Ph.D., in an email. “We are pleased to work with her and hope to work with other Kalamazoo College students in the future.”

Read Monica′s blog post here.

Cool Frustration

Chemistry major Virginia GreenbergerDuring the second summer of research on her Senior Independent Project (SIP), chemistry major Virginia Greenberger (pictured at left) is spending more time in method development than data collection. Here’s the thing about that: “We’ve never done this work before,” says Greenberger. (The other member of “we” is her SIP supervisor, Professor of Chemistry Regina Stevens-Truss; they are trying to develop a method to determine how certain protein pieces—called peptide sequences—kill bacteria.) That “never-having-done-this-work-before” means her SIP research is on the far edge of new discovery, which makes it very cool. But it can also be very frustrating—just one example: the peptide sequences are “sticky” and prone to clump, which makes methods to effectively study them more difficult to develop.

Some back story, which goes back further than last summer. About a decade and a half ago, Stevens-Truss noticed that bacteria she’d altered to produce a certain peptide were being killed by that peptide. Very interesting discovery, on hold for a dozen or so years. Then last summer Stevens-Truss and Greenberger began to study in earnest the protein components responsible for killing the bacteria. These peptide sequences are spiral in shape and carry a positive charge. Shape and charge are matters of chemistry and potential chemical alteration. Summer number one focused on which peptide sequences were the most effective killers of which kinds of bacteria–gram positive (Staph aureus, for example) and gram negative (E-coli, for example). The research team devised a method that uses light to determine the degree to which various peptide sequences inhibit various bacteria. Roughly speaking, “cloudy” or opaque solutions (that block light) mean the bacteria are not much affected by the peptide sequence, but a clear solution indicates significant antibacterial activity. The research could eventually prove very important. Ours is an age of antibiotic resistance. Certain bacteria cause serious infectious diseases, but their reproduction rate (combined with human misuse of antibiotics) selects for resistant strains.

Summer two’s work seeks to repeat (and confirm) the results of last summer and determine how the effective bacterial assassins do their work. How does one determine that? Greenberger is currently working on a method that infuses liposomes with dyes. Liposomes are bag-like structures whose membranes mimic the membranes of cells. A killing mechanism by which the spiral-shaped peptide sequences drill through bacterial cell membranes would be suggested if the liposome look-alikes suddenly release their dyes. That’s the method on which Greenberger was currently at work at the time of this interview. The working title of her SIP is “Studying Antibiotic Action of Peptide Sequences containing a Cationic Amphipathic Helix Structure.” But that could change, depending on that ever-changing ratio of “cool” to “frustrating.”

K Grads Receive “Preferred” Admissions Status to New WMU Medical School

The new Western Michigan University School of Medicine (WMed) has announced a “preferred” relationship with Kalamazoo College, Western Michigan University (WMU), and WMU’s Lee Honors College. Prospective students from these institutions may apply to WMed through the American Medical College Application Service, a centralized application processing service available to applicants to first-year entering classes at participating U.S. medical schools. Students will be selected through the regular selection process and must meet all admission requirements. All things being equal, students from K, WMU, and Lee will receive preference in admission.

“We are excited about this relationship between K and Western Michigan University School of Medicine,” said Kalamazoo College Provost Mickey McDonald. “This acknowledges the strength of K’s Health Sciences Program and provides K graduates an opportunity to pursue a medical degree while remaining in southwest Michigan.”

Construction of the new medical school in downtown Kalamazoo is underway. Students in the first WMed class will begin their studies in August 2014.

Freshly Filtered Fertilizer

Samantha Jolly ’15 is building a bike that will help save the world.

As you know, the Kalamazoo College campus is covered with gardens large and small. But did you know that the College produces some its very own compost to fertilize these gardens? It does. And it intends to produce even more this coming year with help from Jolly’s bike.

Compost Intern Sammy Jolly works toward creating a bicycle
Compost Intern Sammy Jolly with the beginnings of the bike.

Jolly and other Student Compost Interns in the K Recycling Department collect food waste from the Living Learning Houses and elsewhere on campus each week and place it in compost bins located in The Grove behind DeWaters and Trowbridge Residence Halls. Last year’s pilot project turned about 3,000 pounds of food waste into composted soil that helps fertilize garden beds across campus.

Mother nature controls much of the composting process, but Jolly and her fellow interns speed that process by regularly turning  compost in the bins with pitchforks and shovels. They also filter out the final product (dirt, essentially) from the active material by shaking it all through hand-held screens.

Here’s where the world-saving bike comes in. Working from her own design and with help from K Recycling Director Rob Townsend, Jolly is building a stationary bike to help separate the finely composted soil from larger chunks. Instead of a rear wheel, her bike features a cylinder made of chicken wire stretched around old bike wheel rims. A bike chain connects the cylinder, which straddles the legs of an old College bunk bed, to the bike gears.

Students shovel compost into the cylinder, jump on the bike seat, and pedal. The chain turns the cylinder, which churns the compost. A wheelbarrow strategically placed under the cylinder catches the fine freshly filtered fertilizer.

Thereby saving the world. Or at least one small corner of it in Kalamazoo, Michigan.

“It′s been really fun trying to find things to recycle and turn into this sifter. It′s like one giant recycling project. I have to build a machine out of recycled parts to help recycle our food waste!” said Jolly.

K-Plan Cultivation

Kalamazoo College students may not be in class during the summer, but they are busy cultivating their K-Plans, across the country and around the world, in externships and internships supported by the Center for Career and Professional Development.

This summer 109 students are taking part in the CCPD’s summer career development programs. The Discovery Externship Program, in its 12th year, offers 46 first-year and sophomore students the opportunity to test the waters of a possible career by living and working with an alumni or parent professional for up to four weeks. Externs and hosts agree that the intensity of sharing both workday and “porchtime” experiences leads to rich relationships and deep discovery about the reality of the working world. This summer discovery externs can be found shadowing alumni in hospitals and health networks, a maritime museum, an organic food truck, dentistry and veterinary practices, financial and consulting firms, a school in India and a farm in Michigan.

To ensure the educational quality of their workplace experience, interns enrolled in the CCPD’s Field Experience Program agree with their supervisor on a learning contract outlining mutual goals and objectives for their summer together. They commit to regular structured reflection about their workplace experience, and they receive evaluation feedback at the conclusion of the internship. This summer, 63 interns are spending at least six weeks working with alumni professionals, Kalamazoo area non-profits, social justice organizations, and a wide range of independently-secured experiences across the country. Most Field Experience Program interns receive a stipend to help defray the costs of their unpaid experiences.

Externships and internships challenge students to apply theoretical learning to practical situations and to examine assumptions about work and careers. One current student mid-way through her internship described her summer work experience as “both gratifying and challenging.” She said, “In many ways this internship is not meeting my expectations and is showing me how off-base those expectations have been. These past three weeks have helped me rid myself of assumptions I held, and have given me new ways of thinking about how work at a non-profit can be done.”

The CCPD is already at work recruiting hosts and supervisors for summer 2014. Alumni and parents interested in offering a workplace experience to a student may contact career@kzoo.edu to request more information about becoming part of the Discovery Externship Program or the Field Experience Program.

A First-Class Large Class

The Kalamazoo College class of 2017 is coming this fall and it is the most numerous class the College has ever seen: 463 strong! And no member of the class has changed his or her mind about coming so far—a phenomenon known as “summer melt,” which is usually in process by this time of the summer.

Most of the incoming class comes from Michigan, but 30 percent come from out of state. And 34 international students are heading here from around the world to study at K! The College’s international student body has been rising at a steady rate for several years.

And 2017 a first-class large class. More than 400 of its members volunteer for worthy causes. When they are not volunteering they are busy in sports, choir, band, and the National Honor Society, among other activities.

At least 150 of the incoming students played one or more sports; 129 were the captains of a sports team.

If you can’t move your feet, you can at least go with the beat—171 reported to be in band or choir.

And 190 are members of the National Honors Society. Not surprising given the class’ average GPA and ACT scores are 3.58 and 29, respectively.

Odds and Ends With a K Connection

Matters of T-shirts, essays, and scholarships meant good news for three people who share a Kalamazoo College connection.

Kalamazoo College alumnus Chris Tower on the quad
Chris Tower ′85

Writer and college instructor Chris Tower ’85 shows off his Kalamazoo College pride on his T-Shirt blog, “I would not be the person I am today if I had not attended and ultimately graduated from Kalamazoo College.”

Congratulations to Tessa Moore ’15. Her essay, The Ezili, earned her the Voynovich Scholarship, which hasn’t been awarded since 2008.

Kalamazoo College alumna Mariah Hennen
Mariah Hennen ′15 at Harvest Fest, fall 2012.

Mariah Hennen ’15 was 35 out of more than 100 students nationwide to be awarded the Jo Anne J. Trow National Scholarship. Recipients must maintain a 3.5 GPA. Selections are based on academic records, applicants’ statements, and campus and community activities.